I would stick a wideband on it and go for a drive. If it runs really rich when it is shuffling, If it runs lean then it may indicate a missfire, then you can narrow it down to that, but i would sya it is running rich far more often than that to thin the oil in that time.
Seperating the charge all the way though the intercooler may help, but a balance pipe between the manifolds is more likely to help, It might help to know exactly what turbos you have, 2871's shouldnt really surge, but 2876's most likely would. Can you post up a screeenshot of the fuel map.