i have had this issue for a while and it has just gotten worse. it used to be that at idle it had a slight pop. now it is at idle, or cruising at very low throttle. odesn't really matter what rpm it is. i can make it do it at 4000rpm if i go along at a steady speed and just keep the throttle in the 1 spot. you will feel it be a bit sluggish, then it will clear, then it will do it again a few seconds later. if you floor it it will sometimes have an ever so slight hesitation, then it will rev out, and you can go up through the gears without any problems. it only seems to be if you go from cruise to WOT quickly.
i thought it may have been the afm, so i cleaned it last night. didn't help. the spark plugs aren't that old (about 4000k's, and the missfire has been happening for about 2000k's), but going to replace them anyway (they are currently BCPR6ES gapped at 0.8mm). coils are taped up.
its an r33 rb25det manual. i'm running stock bov, turbo back exhaust, $22 boost controller, pod, fmic, remapped ecu (but i stuck the stock ecu in and it still does it). it doesn't seem to do it until the o2 sensor comes up to temp and the signal starts to bounce (i have a air/fuel gauge - i like flashy lights). the o2 sensor is only a few months old as well, but might try my old sensor again.
any other ideas as to what it may be. can't find any vacuum leaks, but going to have another look tonight. might have to clean the aac valve again (it was also only done a few months ago).